59ssaha-hash: crashes when pathchange?
- Feb 2, 2006Hi,
I have a very very weird problem here. Isolating it took me a couple
I have to put the hashfiles and the query file in two different
a) When I run ssaha from the directory where the hash files are
located, everything works fine.
b) when I run ssaha from the directory where the query file is
located, it crashes with the following (not very informative) error
ssaha: ..//SequenceReader/SequenceReader.cpp:305: const char *
SourceReaderIndex::extractName(unsigned int): Assertion
It's a standard debian linux box (colinux'ed though), with an ext2
filesystem. Here are the two command lines:
a) "ssaha ~/usr/genotrace/odmrna.fa hash.fasta.oikopleura_dioica.001
-sf hash -ph"
b) "ssaha odmrna.fa
~/tracedb/od/ssaha/hash.fasta.oikopleura_dioica.001 -sf hash -ph "
---> ERROR MESSAGE
Any ideas on this?!?!
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