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49SSAHA Psuedocode documentation

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  • greenexile4568
    Nov 27, 2005
      Hi,
      Is there a pseudocode representation of the SSAHA algorithm ?

      I'm particulary interested in learning what approaches were taken to
      implement the various key steps in the algorithm. For example did you
      use a decrease and conquer approach when generating the possible kmer
      permutations..

      Be grateful for any information you can provide
      Thanks
      Brian Wilson
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