- Jan 24, 2003Hello!
Today i tried to compile and run SSAHA V3.0 on a linux machine
gcc version 2.95.4 20011002 (Debian prerelease)
While it compiled fine, running testSequenceReaderFasta resulted
in Test 17 failing with:
int main(): Assertion `c1==c2' failed.
Also, if i run testSSAHA.csh it fails during
TEST: Checking main runs with default arguments
with the output:
Info: running DNA query against DNA hash table.
I already started to locate the problem and it appears to occur in
void MatchTaskAlign::operator()(MatchStore& store)
included from MatchAligner.cpp
subjectSource_.extractSource( &pSubject, //subjectData,
Any help would be appreciated (i will try to find out more during the
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