nmrPipe hcch-tocsy processing
- Dear All,
I have an hcch-tocsy experiment (hcchtocsy.fa) that can be processed on
Bruker using States in 13C and States in 1H indirect-detect
dimension. This experiment does not process correctly in nmrPipe using any
of the following combinations
1H-direct 13C 1H-indirect
Complex States States
DQD States States
Complex Complex Complex
DQD Complex Complex
Complex States-TPPI States-TPPI
DQD States-TPPI States-TPPI
Anyone seen this, or similar problem? Suggestions?
Thanks in advance,
- Howdy to all...
Has anyone been able to get the drx2pipe script
working under Linux (specifically, RedHat 8.0) with
Bruker Avance data acquired using xwinnmr 2.6?
I keep trying to run the script, but I get an error
message after it tries to read the acqu data, claiming
that either the 1st FID was never properly completed,
or that the data doesn't come from an Avance.
Thanks in advance.
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- Hi Ronald,
I have not tried it under Linux, so I have no idea if it should work.
However the error you get relates to the instrument name. You either
need to edit the allowed string(s) for the instrument name in the
drx2pipe script (the line should be highlighted) or remove that section
altogether. If you have not set an alias, the instrument name is
"spect", and this is not one of the default allowed names. I put it in
because I like to check experiments as they are running, and this
ensures the parameters in the acqus files are correct - they are only
updated after the first FID is written to disk.
"Ronald Shin, PhD" wrote:
> Howdy to all...
> Has anyone been able to get the drx2pipe script
> working under Linux (specifically, RedHat 8.0) with
> Bruker Avance data acquired using xwinnmr 2.6?
> I keep trying to run the script, but I get an error
> message after it tries to read the acqu data, claiming
> that either the 1st FID was never properly completed,
> or that the data doesn't come from an Avance.
> Thanks in advance.
> Do you Yahoo!?
> The New Yahoo! Search - Faster. Easier. Bingo.
> Your use of Yahoo! Groups is subject to http://docs.yahoo.com/info/terms/
Duncan M Smith
Discovery Analytical Sciences
One Amgen Center Drive
Phone (805) 447-3171
Fax (805) 480-3015
- Hello all,
Is there a command for setting the pivot for phase correction in
nmrPipe? I've tried to find one but cannot?
Thanks in advance
Mike Osborne | Tel: 514-847-9494 (O)
NMR Group |
McGill Univeristy |
3655 Promenade Sir William Osler | Fax: 514-389-7384
Montreal, Quebec, H3G 1Y6 |
Canada | e_mail: mike.osborne@...